Tuesday, April 24, 2007

BioWeka 0.7.0 released

This release contains some important changes and bug fixes:
  • We changed the architecture of the alignment packages. The new aligner classes are found in packages which refer to the source of the underlying algorithm code (e.g. bioweka.aligners.jaligner.SmithWatermanGotohAligner).
  • The new release solves a problem when using the "supply test set" option with BlastClassifier or SimpleAlignmentClassifier, which lead to incorrect results in previous releases (other options like cross-validation or percentage split were not affected).
  • The interface of the BlastParser and the converter classes for sequence-based data formats have been updated.

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